@JanJo to use this tool would you normally edit the $:/core/ui/PageTemplate/story to add a class(s) to enable the widgets?.
Or can you describe what changes you do? perhaps other tiddlers?
I do not use the hammer tools as I typically don’t use a touch screen, however I am now quite familiar with the cascade mechanism.
I see at http://hammerwidgets.tiddlyspot.com/ at least the following tiddlers need to be edited;
$:/core/ui/EditTemplate/body/editor
$:/core/ui/EditTemplate
$:/core/ui/PageTemplate/story
$:/core/ui/ViewTemplate
The Story Tiddler Cascade loads the View or edit templates, which access config tiddlers - to find which template to use;
$:/config/ui/ViewTemplate = $:/core/ui/ViewTemplate
$:/config/ui/EditTemplate = $:/core/ui/EditTemplate
So for these templates at least you can alter the config file (a shadow) to point to a modified one, and easily restore the defaults.
However above I see also $:/core/ui/PageTemplate/story and $:/core/ui/EditTemplate/body/editor may need to change, possibly others so perhaps it would be better implemented as a new Layout which allows you to start with a new $:/core/ui/PageTemplate and alternative’s for each of the edited tiddlers.
I am not yet fully versed in alternative Page layouts however I believe a large component is styles.
Note: Whilst exploring http://hammerwidgets.tiddlyspot.com/ I was getting errors on the wiki that you described so I could not explore the full story.